Cti-MIR156k

Basic info.

• miRNA locus ID
• Cti-MIR156k

• miRNA locus accession
• PmiREN003277

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01141361.1  1509  1631  -

• Comments
• A member of family MIR156

• Confidence level
• 

Secondary strurture and sequence

  ATGTTCATAAAAAAAGA          -      T      T     T   -T      GA
                   AGTTGACAGA AGAGAG GAGCAT CATAG TTT  GCATGA  
                   |||||||||| |||||| |||||| ||||| |||  ||||||  A
                   TCGACTGTCT TCTCTC CTCGTA GTATT AAG  CGTATT  
CCCCTCTCTCTCTCNTTTA          A      T      C     T   TT      GT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]