Cti-MIR156e

Basic info.

• miRNA locus ID
• Cti-MIR156e

• miRNA locus accession
• PmiREN003271

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01229481.1  69  219  +

• Comments
• A member of family MIR156

• Confidence level
• 

Secondary strurture and sequence

    GT     A   CA  A           -    A         G    -------   T  TTGCATGATATTAGGGAGA
      GCGTA GGG  GG GTGGTGACAGA AGAG GTGAGCACA ATGG       GCT TC                   
      ||||| |||  || ||||||||||| |||| ||||||||| ||||       ||| ||                    
      TGTAT TTC  CC CACCACTGTCT TCTC CACTCGTGT TATC       GTG TT                   
GTTCTC     G   -A  -           A    C         G    GAAGTTC   -  CTTGCAAACACAGCGATAT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]