Cti-MIR156c

Basic info.

• miRNA locus ID
• Cti-MIR156c

• miRNA locus accession
• PmiREN003269

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01205847.1  1  183  -

• Comments
• A member of family MIR156

• Confidence level
• 

Secondary strurture and sequence

ATATGCTC      -  G              A        CCC    GCTATC           ATATATATCATA  A   G        TT   GTGT   AT
        GAAGCT AT TGTGCTCACTCTCT TCTGTCAT   CTCC      TTTCTTTATAT            TT TAC TCTTGATC  CTT    TAA  
        |||||| || |||||||||||||| ||||||||   ||||      |||||||||||            || ||| ||||||||  |||    |||   
        TTTCGG TA ACACGAGTGAGAGA AGACAGTG   GAGG      AAGGGAATGTG            AG ATG GGAACTAG  GAG    GTT  
      CT      G  G              -        -TT    ------           ------------  A   -        CT   -TGT   TG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]